Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810025.1_cds_XP_016496045.1_10306
CDS Infomation

[gene=LOC107815047] [db_xref=GeneID:107815047] [protein=transcription factor TFIIIB component B'' homolog] [protein_id=XP_016496045.1] [location=join(15192..15237,15322..15486,15755..15912,15988..16051,16219..16400,16521..16578,16658..16998,17119..17506,17583..17683,17798..17841,20610..20796,22625..22769,24013..24146,26512..26658)] [gbkey=CDS]
Sequence

ATGGACCTTTTAGATGATATTTTGGCTGATGGTGCTTCAAAGACCGTCAAGGCTGGAGGC
AAGTTTCAACCCAGGGCAAAGCCTCGTCTGGTGAAAAAAGGTCCAGCTGTTGCATCCTCA
ACAGTTTCTTTGACGTCAAAACCCACTGGTGATACTGTAGCAACTGATTCTTTTGAGGCT
CTTAAGAAGGATGGAAAGAATTCCCAAAATTACGATAAACAAAGCTCTGTGTTAGCGGAA
CCTTCCTTGGAGCATCCTCTTGCTGCAGAAACTTTGGGTCCATCAGTTGGTTCATATCTA
GATACAAGTATGGTAGTGCCTGATAACAGTGAAGATTCGAAAACTTGTCTTGAGAAATCC
GAGGGAGAGTATGCAGACATATATATAGGTTTGGATTCGTTTGATGATTTACTTCCTATC
TCAAGCGCCATAGAAAATTCTAGTCCCGCTACAGATCCATCTGCTGTTCATGTTGCTGGT
GCAGACAAGGGACAAGAACAACTTTCAATTCCAGTTTCTTCAGTTGATGATTCAGCTCCT
AGCACTTCTAATCTTCAACCTGATGAAGTGGCAGCATGCCAAGATCCATTGACTTGTCAA
GGAAGTGTTGTTCCTGAGATGGACAGCTATCCTTCCTTGGAAGCAGATATCCTTGGGGTA
ACTACTACGTCTGGGCAGAGTACCAGAAGGTTTCAACCCAAGTCCAAGCTACAAGTATAC
AGAGAGAGATACGACACAAGCATCCCTGATTCAGATGCAGTAGAGTCAGTTTCATGTCAG
CCAAATTCACACTCAGTTCATTCTGAAATGGATTTTGTGGATAGAGAGAAGGAACATGGA
TTCCCTGCTGATGATGTCCTTGATTTCTCAGCCAGAGGATTTGATAATAATATTATTACA
GAATCTACTCATGAATTTCCAGTTCATGAAGAATATGTTATCGAGGCTTCGCATTCAGAT
GTTGGCATCCCAGCAGAACTCCCTGAATCTACTTCTCAGATGCCTGAGGAACCTGTACAT
CAGAGGCCAAAGACTAAAAAGCAAAAATTGCCTGCATCTGATCTTTCTGCAATTACTGAA
GAGAATGGAGCGGGTAGATCATTAAGGAGTAGAAGAAAGTCCGTAAATGCAAATAGACTA
GTAGATGAGTCTGAAGTAGTAGCGGATGATGGGGAATATGTGCCTGAACAACCTAATGAT
TCTGTTACAAATGGTAATGATGAGGATCTTCTGGTGGAAAATGAATCACAAGGGAAAAAA
GTACAGAAAAAGTCAAAGAGAACAGTTGCCGAGGATAGAAAGCAAGTTAGGAAGAGTAAA
AAGACCACTGAAGCTTCAGACCAGGCAGCCAACAAGAAACCTAAGAAGTTTTCTCACTCC
ACTCGTCAAAAGAGGAGACAAGTGAACAAGGCTTTGCTTGAGGCTCCCGAGTATGAGATT
GACTACCAAAAGGTACCTATTAAGGATCTAATTATATTAGGAGAGCACAGAGAGCGGCTG
GCGAAAAAAGATGCTGCAGCGTCACAAATACCTACTACAGATCAGAGTGCTGGTGCTTCT
GTTTCTAATTATAATGAGGATGAGACCTATCCTTCAGATGACGGTGCAGAAGATAATGAT
CATCAAATAGGTTCTCGGGCTCAAGATTCTTCTGCCTACTTCAATTATCAAACTTATATG
GACAAAACACCCAGCACAAGGTGGTCAAAACAGGAAACAGAACTGTTCTATGAGGCTGTG
CAGCAGTTTGGGACTGACTTATCCCTGATACAACAACTTTTTCCTGGCCGGACACGTAGA
CAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAACATCCATTTAGGCTTCATGATGCT
CTAACCAATCGTTCCAAAGATCATTCCCACTTTGAACGAGTAATTGAGCGTTTAAAACAA
ATTGAAGCCGAGGAATTGCAGAAAGCCGATAAAGATGAGTCAACTGACTTGACAGGGGAG
GAGGAAGTGGAGGAGGGAACTCAGGAGATCAATGAGGAAGAAGCGAATTCTGAACATGTT
GAGGAAAAAGAAGTTGAAGCTGTGGAGCAACAAGATGTTCCAGAAATGGAGAGTCCAGTT
GAGGACTATGATAGTGAAGATGATTCTTGGAGATGGAGTCAGTATAAGAGTGAAGTGTGA

Peptide Sequence

PEP ID

XP_016496045.1
PEP Infomation

PREDICTED: transcription factor TFIIIB component B'' homolog [Nicotiana tabacum]
Sequence

MDLLDDILADGASKTVKAGGKFQPRAKPRLVKKGPAVASSTVSLTSKPTGDTVATDSFEA
LKKDGKNSQNYDKQSSVLAEPSLEHPLAAETLGPSVGSYLDTSMVVPDNSEDSKTCLEKS
EGEYADIYIGLDSFDDLLPISSAIENSSPATDPSAVHVAGADKGQEQLSIPVSSVDDSAP
STSNLQPDEVAACQDPLTCQGSVVPEMDSYPSLEADILGVTTTSGQSTRRFQPKSKLQVY
RERYDTSIPDSDAVESVSCQPNSHSVHSEMDFVDREKEHGFPADDVLDFSARGFDNNIIT
ESTHEFPVHEEYVIEASHSDVGIPAELPESTSQMPEEPVHQRPKTKKQKLPASDLSAITE
ENGAGRSLRSRRKSVNANRLVDESEVVADDGEYVPEQPNDSVTNGNDEDLLVENESQGKK
VQKKSKRTVAEDRKQVRKSKKTTEASDQAANKKPKKFSHSTRQKRRQVNKALLEAPEYEI
DYQKVPIKDLIILGEHRERLAKKDAAASQIPTTDQSAGASVSNYNEDETYPSDDGAEDND
HQIGSRAQDSSAYFNYQTYMDKTPSTRWSKQETELFYEAVQQFGTDLSLIQQLFPGRTRR
QLKLKYKKEERQHPFRLHDALTNRSKDHSHFERVIERLKQIEAEELQKADKDESTDLTGE
EEVEEGTQEINEEEANSEHVEEKEVEAVEQQDVPEMESPVEDYDSEDDSWRWSQYKSEV

Transcript Sequence

Gene sequence data has not been registered.